Posts Tagged ‘tmp’

How to solve “Incorrect key file for table ‘/tmp/#sql_9315.MYI’; try to repair it” mysql start up error

Saturday, April 28th, 2012

When a server hard disk scape gets filled its common that Apache returns empty (no content) pages…
This just happened in one server I administer. To restore the normal server operation I freed some space by deleting old obsolete backups.
Actually the whole reasons for this mess was an enormous backup files, which on the last monthly backup overfilled the disk empty space.

Though, I freed about 400GB of space on the the root filesystem and on a first glimpse the system had plenty of free hard drive space, still restarting the MySQL server refused to start up properly and spit error:

Incorrect key file for table '/tmp/#sql_9315.MYI'; try to repair it" mysql start up error

Besides that there have been corrupted (crashed) tables, which reported next to above error.
Checking in /tmp/#sql_9315.MYI, I couldn't see any MYI – (MyISAM) format file. A quick google look up revealed that this error is caused by not enough disk space. This was puzzling as I can see both /var and / partitions had plenty of space so this shouldn't be a problem. Also manally creating the file /tmp/#sql_9315.MYI with:

server:~# touch /tmp/#sql_9315.MYI

Didn't help it, though the file created fine. Anyways a bit of a closer examination I've noticed a /tmp filesystem mounted besides with the other file system mounts ????
You can guess my great amazement to find this 1 Megabyte only /tmp filesystem hanging on the server mounted on the server.

I didn't mounted this 1 Megabyte filesystem, so it was either an intruder or some kind of "weird" bug…
I digged in Googling to see, if I can find more on the error and found actually the whole mess with this 1 mb mounted /tmp partition is caused by, just recently introduced Debian init script /etc/init.d/mountoverflowtmp.
It seems this script was introduced in Debian newer releases. mountoverflowtmp is some kind of emergency script, which is triggered in case if the root filesystem/ space gets filled.
The script has only two options:

# /etc/init.d/mountoverflowtmp
Usage: mountoverflowtmp [start|stop]

Once started what it does it remounts the /tmp to be 1 megabyte in size and stops its execution like it never run. Well maybe, the developers had something in mind with introducing this script I will not argue. What I should complain though is the script design is completely broken. Once the script gets "activated" and does its job. This 1MB mount stays like this, even if hard disk space is freed on the root partition – / ….

Hence to cope with this unhandy situation, once I had freed disk space on the root partition for some reason mountoverflowtmp stop option was not working,
So I had to initiate "hard" unmount:

server:~# mount -l /tmp

Also as I had a bunch of crashed tables and to fix them, also issued on each of the broken tables reported on /etc/init.d/mysql start start-up.

server:~# mysql -u root -p
mysql> use Database_Name;
mysql> repair table Table_Name extended;
....

Then to finally solve the stupid Incorrect key file for table '/tmp/#sql_XXYYZZ33444.MYI'; try to repair it error, I had to restart once again the SQL server:

Stopping MySQL database server: mysqld.
Starting MySQL database server: mysqld.
Checking for corrupt, not cleanly closed and upgrade needing tables..
root@server:/etc/init.d#

Tadadadadam!, SQL now loads and works back as before!

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How to delete million of files on busy Linux servers (Work out Argument list too long)

Tuesday, March 20th, 2012

How to Delete million or many thousands of files in the same directory on GNU / Linux and FreeBSD

If you try to delete more than 131072 of files on Linux with rm -f *, where the files are all stored in the same directory, you will get an error:

/bin/rm: Argument list too long.

I've earlier blogged on deleting multiple files on Linux and FreeBSD and this is not my first time facing this error.
Anyways, as time passed, I've found few other new ways to delete large multitudes of files from a server.

In this article, I will explain shortly few approaches to delete few million of obsolete files to clean some space on your server.
Here are 3 methods to use to clean your tons of junk files.

1. Using Linux find command to wipe out millions of files

a.) Finding and deleting files using find's -exec switch:

# find . -type f -exec rm -fv {} \;

This method works fine but it has 1 downside, file deletion is too slow as for each found file external rm command is invoked.

For half a million of files or more, using this method will take "long". However from a server hard disk stressing point of view it is not so bad as, the files deletion is not putting too much strain on the server hard disk.
b.) Finding and deleting big number of files with find's -delete argument:

Luckily, there is a better way to delete the files, by using find's command embedded -delete argument:

# find . -type f -print -delete

c.) Deleting and printing out deleted files with find's -print arg

If you would like to output on your terminal, what files find is deleting in "real time" add -print:

# find . -type f -print -delete

To prevent your server hard disk from being stressed and hence save your self from server normal operation "outages", it is good to combine find command with ionice, e.g.:

# ionice -c 3 find . -type f -print -delete

Just note, that ionice cannot guarantee find's opeartions will not affect severely hard disk i/o requests. On  heavily busy servers with high amounts of disk i/o writes still applying the ionice will not prevent the server from being hanged! Be sure to always keep an eye on the server, while deleting the files nomatter with or without ionice. if throughout find execution, the server gets lagged in serving its ordinary client requests or whatever, stop the execution of the cmd immediately by killing it from another ssh session or tty (if physically on the server).

2. Using a simple bash loop with rm command to delete "tons" of files

An alternative way is to use a bash loop, to print each of the files in the directory and issue /bin/rm on each of the loop elements (files) like so:

for i in *; do
rm -f $i;
done

If you'd like to print what you will be deleting add an echo to the loop:

# for i in $(echo *); do \
echo "Deleting : $i"; rm -f $i; \

The bash loop, worked like a charm in my case so I really warmly recommend this method, whenever you need to delete more than 500 000+ files in a directory.

3. Deleting multiple files with perl

Deleting multiple files with perl is not a bad idea at all.
Here is a perl one liner, to delete all files contained within a directory:

# perl -e 'for(<*>){((stat)[9]<(unlink))}'

If you prefer to use more human readable perl script to delete a multitide of files use delete_multple_files_in_dir_perl.pl

Using perl interpreter to delete thousand of files is quick, really, really quick.
I did not benchmark it on the server, how quick exactly is it, but I guess the delete rate should be similar to find command. Its possible even in some cases the perl loop is  quicker …

4. Using PHP script to delete a multiple files

Using a short php script to delete files file by file in a loop similar to above bash script is another option.
To do deletion  with PHP, use this little PHP script:

<?php
$dir = "/path/to/dir/with/files";
$dh = opendir( $dir);
$i = 0;
while (($file = readdir($dh)) !== false) {
$file = "$dir/$file";
if (is_file( $file)) {
unlink( $file);
if (!(++$i % 1000)) {
echo "$i files removed\n";
}
}
}
?>

As you see the script reads the $dir defined directory and loops through it, opening file by file and doing a delete for each of its loop elements.
You should already know PHP is slow, so this method is only useful if you have to delete many thousands of files on a shared hosting server with no (ssh) shell access.

This php script is taken from Steve Kamerman's blog . I would like also to express my big gratitude to Steve for writting such a wonderful post. His post actually become  inspiration for this article to become reality.

You can also download the php delete million of files script sample here

To use it rename delete_millioon_of_files_in_a_dir.php.txt to delete_millioon_of_files_in_a_dir.php and run it through a browser .

Note that you might need to run it multiple times, cause many shared hosting servers are configured to exit a php script which keeps running for too long.
Alternatively the script can be run through shell with PHP cli:

php -l delete_millioon_of_files_in_a_dir.php.txt.

5. So What is the "best" way to delete million of files on Linux?

In order to find out which method is quicker in terms of execution time I did a home brew benchmarking on my thinkpad notebook.

a) Creating 509072 of sample files.

Again, I used bash loop to create many thousands of files in order to benchmark.
I didn't wanted to put this load on a productive server and hence I used my own notebook to conduct the benchmarks. As my notebook is not a server the benchmarks might be partially incorrect, however I believe still .they're pretty good indicator on which deletion method would be better.

hipo@noah:~$ mkdir /tmp/test
hipo@noah:~$ cd /tmp/test;
hiponoah:/tmp/test$ for i in $(seq 1 509072); do echo aaaa >> $i.txt; done

I had to wait few minutes until I have at hand 509072  of files created. Each of the files as you can read is containing the sample "aaaa" string.

b) Calculating the number of files in the directory

Once the command was completed to make sure all the 509072 were existing, I used a find + wc cmd to calculate the directory contained number of files:

hipo@noah:/tmp/test$ find . -maxdepth 1 -type f |wc -l
509072

real 0m1.886s
user 0m0.440s
sys 0m1.332s

Its intesrsting, using an ls command to calculate the files is less efficient than using find:

hipo@noah:/tmp/test$ time ls -1 |wc -l
509072

real 0m3.355s
user 0m2.696s
sys 0m0.528s

c) benchmarking the different file deleting methods with time

- Testing delete speed of find

hipo@noah:/tmp/test$ time find . -maxdepth 1 -type f -delete
real 15m40.853s
user 0m0.908s
sys 0m22.357s

You see, using find to delete the files is not either too slow nor light quick.

- How fast is perl loop in multitude file deletion ?

hipo@noah:/tmp/test$ time perl -e 'for(<*>){((stat)[9]<(unlink))}'real 6m24.669suser 0m2.980ssys 0m22.673s

Deleting my sample 509072 took 6 mins and 24 secs. This is about 3 times faster than find! GO-GO perl :)
As you can see from the results, perl is a great and time saving, way to delete 500 000 files.

- The approximate speed deletion rate of of for + rm bash loop

hipo@noah:/tmp/test$ time for i in *; do rm -f $i; done

real 206m15.081s
user 2m38.954s
sys 195m38.182s

You see the execution took 195m en 38 secs = 3 HOURS and 43 MINUTES!!!! This is extremely slow ! But works like a charm as the running of deletion didn't impacted my normal laptop browsing. While the script was running I was mostly browsing through few not so heavy (non flash) websites and doing some other stuff in gnome-terminal) :)

As you can imagine running a bash loop is a bit CPU intensive, but puts less stress on the hard disk read/write operations. Therefore its clear using it is always a good practice when deletion of many files on a dedi servers is required.

b) my production server file deleting experience

On a production server I only tested two of all the listed methods to delete my files. The production server, where I tested is running Debian GNU / Linux Squeeze 6.0.3. There I had a task to delete few million of files.
The tested methods tried on the server were:

- The find . type -f -delete method.

- for i in *; do rm -f $i; done

The results from using find -delete method was quite sad, as the server almost hanged under the heavy hard disk load the command produced.

With the for script all went smoothly. The files were deleted for a long long time (like few hours), but while it was running, the server continued with no interruptions..

While the bash loop was running, the server load avarage kept at steady 4
Taking my experience in mind, If you're running a production, server and you're still wondering which delete method to use to wipe some multitude of files, I would recommend you go  the bash for loop + /bin/rm way. Yes, it is extremely slow, expect it run for some half an hour or so but puts not too much extra load on the server..

Using the PHP script will probably be slow and inefficient, if compared to both find and the a bash loop.. I didn't give it a try yet, but suppose it will be either equal in time or at least few times slower than bash.

If you have tried the php script and you have some observations, please drop some comment to tell me how it performs.

To sum it up;

Even though there are "hacks" to clean up some messy parsing directory full of few million of junk files, having such a directory should never exist on the first place.

Frankly, keeping millions of files within the same directory is very stupid idea.
Doing so will have a severe negative impact on a directory listing performance of your filesystem in the long term.

If you know better (more efficient) ways to delete a multitude of files in a dir please share in comments.

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How to disable tidy HTML corrector and validator to output error and warning messages

Sunday, March 18th, 2012

I've noticed in /var/log/apache2/error.log on one of the Debian servers I manage a lot of warnings and errors produced by tidy HTML syntax checker and reformatter program.

There were actually quite plenty frequently appearing messages in the the log like:

...
To learn more about HTML Tidy see http://tidy.sourceforge.net
Please fill bug reports and queries using the "tracker" on the Tidy web site.
Additionally, questions can be sent to html-tidy@w3.org
HTML and CSS specifications are available from http://www.w3.org/
Lobby your company to join W3C, see http://www.w3.org/Consortium
line 1 column 1 - Warning: missing <!DOCTYPE> declaration
line 1 column 1 - Warning: plain text isn't allowed in <head> elements
line 1 column 1 - Info: <head> previously mentioned
line 1 column 1 - Warning: inserting implicit <body>
line 1 column 1 - Warning: inserting missing 'title' element
Info: Document content looks like HTML 3.2
4 warnings, 0 errors were found!
...

I did a quick investigation on where from this messages are logged in error.log, and discovered few .php scripts in one of the websites containing the tidy string.
I used Linux find + grep cmds find in all php files the "tidy "string, like so:

server:~# find . -iname '*.php'-exec grep -rli 'tidy' '{}' \;
find . -iname '*.php' -exec grep -rli 'tidy' '{}' \; ./new_design/modules/index.mod.php
./modules/index.mod.php
./modules/index_1.mod.php
./modules/index1.mod.php

Opening the files, with vim to check about how tidy is invoked, revealed tidy calls like:

exec('/usr/bin/tidy -e -ashtml -utf8 '.$tmp_name,$rett);

As you see the PHP programmers who wrote this website, made a bigtidy mess. Instead of using php5's tidy module, they hard coded tidy external command to be invoked via php's exec(); external tidy command invocation.
This is extremely bad practice, since it spawns the command via a pseudo limited apache shell.
I've notified about the issue, but I don't know when, the external tidy calls will be rewritten.

Until the external tidy invocations are rewritten to use the php tidy module, I decided to at least remove the tidy warnings and errors output.

To remove the warning and error messages I've changed:

exec('/usr/bin/tidy -e -ashtml -utf8 '.$tmp_name,$rett);

exec('/usr/bin/tidy --show-warnings no --show-errors no -q -e -ashtml -utf8 '.$tmp_name,$rett);

The extra switches meaning is like so:

q – instructs tidy to produce quiet output
-e – show only errors and warnings
–show warnings no && –show errors no, completely disable warnings and error output

Onwards tidy no longer logs junk messages in error.log Not logging all this useless warnings and errors has positive effect on overall server performance especially, when the scripts, running /usr/bin/tidy are called as frequently as 1000 times per sec. or more

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How to add repository manually from command line in Ubuntu Linux

Sunday, January 8th, 2012

I'm on a way trying to install Free Mega Games Pack and I'm facing troubles in following the instructions to add a the latest development wine version described on http://www.winehq.org/download/ubuntu
The guys from WineHQ has to update the wine install instructions, since the instructions are targetting older versions of Ubuntu which are not compatible with newer Ubuntus which comes natively with Unity
In order to complete the step in adding the WineHQ Ubuntu PPA development repository my only way was to add it using command line.
Here is how:

root@ubuntu:~# apt-add-repository ppa:ubuntu-wine/ppa
You are about to add the following PPA to your system:
Latest official WineHQ releases
Welcome to the Wine Team PPA. Here you can get the latest available Wine betas for every supported version of Ubuntu. This PPA is managed by Scott Ritchie, and is a replacement for the WineHQ budgetdedicated.com repository used for Jaunty and earlier.
More info: https://launchpad.net/~ubuntu-wine/+archive/ppa
Press [ENTER] to continue or ctrl-c to cancel adding it
Executing: gpg --ignore-time-conflict --no-options --no-default-keyring --secret-keyring /tmp/tmp.bvo21sFWKG --trustdb-name /etc/apt/trustdb.gpg --keyring /etc/apt/trusted.gpg --primary-keyring /etc/apt/trusted.gpg --keyserver hkp://keyserver.ubuntu.com:80/ --recv 883E8688397576B6C509DF495A9A06AEF9CB8DB0
gpg: requesting key F9CB8DB0 from hkp server keyserver.ubuntu.com
gpg: key F9CB8DB0: public key "Launchpad PPA for Ubuntu Wine Team" imported
gpg: no ultimately trusted keys found
gpg: Total number processed: 1
gpg: imported: 1 (RSA: 1)

Similarly adding a PPA repository on Debian is also possible by using a little shell script add-apt-repository.sh . add-apt-repository.sh simulates what ubuntu's apt-add-repositry python script does.

It is educative to mention PPA stands for (Personal package Archive) and the difference between normal repository and PPA is mainly in the fact that PPA repositories makes a package distributed by the repository like the native Ubuntu packages issued by Canonical.
Once for example a new version of a file is placed in PPA deb package repository, the newer package will be automatically installed to the system using it.

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Where does Debian GNU / Linux Apache + PHP stores session files?

Tuesday, November 22nd, 2011

In order to debug some PHP session problems on Debian, I needed to check the count of existing session files.
When PHP is compiled from source usually, by default sessions are stored in /tmp directory, however this is not the case on Debian.

Debian's PHP session directory is different, there the sessions are stored in the directory:

/var/lib/php5

I've discovered the session directory location by reading Debian's cron shell script, which delete session files on every 30 minutes.

Here is the file content:

debian~# cat /etc/cron.d/php5
# /etc/cron.d/php5: crontab fragment for php5
# This purges session files older than X, where X is defined in seconds
# as the largest value of session.gc_maxlifetime from all your php.ini
# files, or 24 minutes if not defined. See /usr/lib/php5/maxlifetime

# Look for and purge old sessions every 30 minutes
09,39 * * * * root [ -x /usr/lib/php5/maxlifetime ] && \
[ -d /var/lib/php5 ] && find /var/lib/php5/ -type f -cmin +$(/usr/lib/php5/maxlifetime) -delete

To check the amount of existing PHP opened session files:

debian:~# ls -1 /var/lib/php5|wc -l
14049

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How to copy CD or DVD on GNU/Linux and FreeBSD using console or terminal

Monday, November 14th, 2011

CD Burning Console Terminal Linux / FreeBSD picture

These days more and more people start to forget the g* / Linux old times when we used to copy CDs from console using dd in conjunction with mkisofs .

Therefore to bring some good memories back of the glorious console times I decided to come up with this little post.

To copy a CD or DVD the first thing one should do is to make an image copy of the present inserted CD into the CD-drive with dd :

1. Make copy of the CD/DVD image using dd

# dd if=/dev/cdrom of=/tmp/mycd.iso bs=2048 conv=notrunc

/dev/cdrom is the location of the cdrom device, on many Linuces including (Debian) /dev/cdrom is just a link to the /dev/ which corresponds to the CD drive. Note on FreeBSD the location for the CD Drive is /dev/acd0
/tmp/mycd.iso instructs dd CD image creation to be placed in /tmp/ directory.
bs argument instructs it about the byte size portions by which the content of the CD-Drive inserted CD will be read. bs value of 2048 is actually only 2KB per dd read, increasing this value will decrease the time required for the CD image to be extracted.

2. Prepare CD image file to be ready for burning

After dd completes the image copy operation, next to prepare the extracted image / ISO to be ready for burning mkisofs is used:

# mkisofs -J -L -r -V TITLE -o /tmp/imagefile.iso /tmp/mycd.iso

The -J option makes the CD compatible for Pcs running Microsoft Windows. The -V TITLE option should be changed to whatever title the new CD should have, -r will add up status bar for the mkisofs operation.
-r is passed to create specific file permissions on the newly created CD, -o specifies the location where mkisofs will produce its file based on the CD image /tmp/mycd.iso .

3. Burning the mkisofs image file to a CD/DVD on GNU / Linux

linux:~# cdrecord -scanbus
linux:~# cdrecord dev=1,0,0 /tmp/imagefile.iso

If all wents okay with cdrecord operation, after a while the CD should be ready.

4. Burning the mkisofs image file to CD on FreeBSD

freebsd# burncd -f /dev/acd0 data /tmp/imagefile.iso fixate

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How to make pptp VPN connection to use IPMI port (IPKVM / Web KVM) on Debian Linux

Wednesday, July 27th, 2011

If you have used KVM, before you certainly have faced the requirement asked by many Dedicated Server Provider, for establishment of a PPTP (mppe / mppoe) or the so called Microsoft VPN tunnel to be able to later access via the tunnel through a Private IP address the web based Java Applet giving control to the Physical screen, monitor and mouse on the server.

This is pretty handy as sometimes the server is not booting and one needs a further direct access to the server physical Monitor.
Establishing the Microsoft VPN connection on Windows is a pretty trivial task and is easily achieved by navigating to:

Properties > Networking (tab) > Select IPv4 > Properties > Advanced > Uncheck "Use default gateway on remote network".

However achiving the same task on Linux seemed to be not such a trivial, task and it seems I cannot find anywhere information or precise procedure how to establish the necessery VPN (ptpt) ms encrypted tunnel.

Thanksfully I was able to find a way to do the same tunnel on my Debian Linux, after a bunch of experimentation with the ppp linux command.

To be able to establish the IPMI VPN tunnel, first I had to install a couple of software packages, e.g.:

root@linux:~# apt-get install ppp pppconfig pppoeconf pptp-linux

Further on it was necessery to load up two kernel modules to enable the pptp mppe support:

root@linux:~# modprobe ppp_mppe
root@linux:~# modprobe ppp-deflate

I've also enabled the modules to be loading up during my next Linux boot with /etc/modules to not be bother to load up the same modules after reboot manually:

root@linux:~# echo ppp_mppe >> /etc/modules
root@linux:~# echo ppp-deflate >> /etc/modules

Another thing I had to do is to enable the require-mppe-128 option in /etc/ppp/options.pptp.
Here is how:

root@linux:~# sed -e 's$#require-mppe-128$require-mppe-128$g' /etc/ppp/options.pptp >> /tmp/options.pptp
root@linux:~# mv /tmp/options.pptp /etc/ppp/options.pptp
root@linux:~# echo 'nodefaultroute' >> /etc/ppp/options.pptp

In order to enable debug log for the ppp tunnel I also edited /etc/syslog.conf and included the following configuration inside:

root@linux:~# vim /etc/syslog.conf
*.=debug;\
news.none;mail.none -/var/log/debug
*.=debug;*.=info;\
*.=debug;*.=info;\
root@linux:~# killall -HUP rsyslogd

The most important part of course is the command line with ppp command to connect to the remote IP via the VPN tunnel ;) , here is how I achieved that:

root@linux:~# pppd debug require-mppe pty "pptp ipmiuk2.net --nolaunchpppd" file /etc/ppp/options.pptp user My_Dedi_Isp_Given_Username password The_Isp_Given_Password


This command, brings up the ppp interface and makes the tunnel between my IP and the remote VPN target host.

Info about the tunnel could be observed with command:

ifconfig -a ppp
ppp0 Link encap:Point-to-Point Protocol
inet addr:10.20.254.32 P-t-P:10.20.0.1 Mask:255.255.255.255
UP POINTOPOINT RUNNING NOARP MULTICAST MTU:1496 Metric:1
RX packets:7 errors:0 dropped:0 overruns:0 frame:0
TX packets:12 errors:0 dropped:0 overruns:0 carrier:0
collisions:0 txqueuelen:3
RX bytes:70 (70.0 B) TX bytes:672 (672.0 B)

One more thing before I could finally access the IPMI's web interface via the private IP was to add routing to the private IP address via the tunnel other side IP address:

# 10.20.0.1 P-t-P IP address
ip route add 10.20.1.124/32 dev ppp0

Now logically one would thing the Web interface to login and use the Java Applet to connect to the server would be accessible but no IT wasn't !

It took me a while to figure out what is the problem and if not the guys in irc.freenode.net ##networking helped me I would never really find out why http://10.20.1.124/ and https://10.20.1.124/ were inaccessible.

Strangely enough both ports 80 and 443 were opened on 10.20.1.124 and it seems like working, however though I can ping both 10.20.1.124 and 10.20.0.1 there was no possible way to access 10.20.1.124 with TCP traffic.

Routing to the Microsoft Tunnel was fine as I've double checked all was fine except whether I tried accessing the IPMI web interface the browser was trying to open the URL and keeps opening like forever.

Thanksfully after a long time of futile try outs, a tip was suggested by a good guy in freenode nick named ne2k

To make the TCP connection in the Microsoft Tunnel work and consequently be able to access the webserver on the remote IPMI host, one needs to change the default MTU set for the ppp0 tunnel interface.
Here is how:


ip link set ppp0 mtu 1438

And tadam! It's done now IPKVM is accessible via http://10.20.1.124 or https://10.20.1.124 web interface. Horay ! :)

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How to fix clamd “ERROR: LOCAL: Socket file /tmp/clamd.socket is in use by another process.”

Monday, May 23rd, 2011

One of the Qmail server installations I’m taking care of’s clamd antivirus process started loading the system heavily.
After a bit of log reading and investigation I’ve found the following error in my /var/log/clamd/current

@400000004dda1e1815cf03f4 ERROR: LOCAL: Socket file /tmp/clamd.socket is in use by another process.

I’ve noticed in my process list that actually I do have two processes clamd :

11608 ? Sl 0:05 /usr/local/sbin/clamd
11632 ? S 0:00 /usr/bin/multilog t /var/log/clamd
16013 ? Sl 0:06 /usr/local/sbin/clamd

It appeared that for some weird reason one of the clamd process was failing to connect constantly to the clam server socket /tmp/clamd.socket and each time it tried to connect and failed to connect to the socket the system gets about 5% of extra load …

Resolving the issues was a piece of cake, all I had to do is stop the clamd server delete the /tmp/clamd.socket and relaunch the clamd server.

Here is exactly the commands I issued:

debian:~# cd /service/
debian:/service# svc -a clamd
debian:/service# svc -h clamd
debian:/service# svc -d clamd
debian:/service# rm -f /tmp/clamd.socket
debian:/service# svc -u clamd

Afterwards the clamd extra load went out and in /var/log/clamd/current I can see clamd loads fine without errors, e.g.:

Listening daemon: PID: 16013
MaxQueue set to: 150
No stats for Database check - forcing reload
Reading databases from /usr/local/share/clamav
Database correctly reloaded (966822 signatures)
SelfCheck: Database status OK.
...

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